Internal File Structure

Internally, locating an offset within a file can be complicated for the operating system. Disk systems typically have a well-defined block size determined by the size of a sector. All disk I/O is performed in units of one block (physical record), and all blocks are the same size. It is unlikely that the physical record size will exactly match the length of the desired logical record. Logical records may even vary in length. Packing a number of logical records into physical blocks is a common solution to this problem.
For example, the UNIX operating system defines all files to be simply streams of bytes. Each byte is individually addressable by its offset from the beginning (or end) of the file. In this case, the logical record size is 1 byte. The file system automatically packs and unpacks bytes into physical disk blocks—
say, 512 bytes per block—as necessary.
The logical record size, physical block size, and packing technique determine how many logical records are in each physical block. The packing can be done either by the user's application program or by the operating system. In either case, the file may be considered to be a sequence of blocks. All the basic I/O functions operate in terms of blocks. The conversion from logical records to physical blocks is a relatively simple software problem.
Because disk space is always allocated in blocks, some portion of the last block of each file is generally wasted. If each block were 512 bytes, for example, then a file of 1,949 bytes would be allocated four blocks (2,048 bytes); the last 99 bytes would be wasted. The waste incurred to keep everything in units
of blocks (instead of bytes) is internal fragmentation. All file systems suffer from internal fragmentation; the larger the block size, the greater the internal fragmentation.